Steps

  1. Sort BAM file to allow indexing:

    samtools sort -O bam -o example_sorted.bam example.bam

  2. Index BAM file:

    samtools index example_sorted.bam

  3. Click on File > Open track…

Untitled

  1. Choose correct files for bam (.bam) and bam index (.bai)

Untitled

  1. Select track and adapter type:

Untitled